contact_map.Concurrence¶
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class
contact_map.Concurrence(values, labels=None)[source]¶ Superclass for contact concurrence objects.
Contact concurrences measure what contacts occur simultaneously in a trajectory. When defining states, one usually wants to characterize based on multiple contacts that are made simultaneously; contact concurrences makes it easier to identify those.
Parameters: - values (list of list of bool) – the whether a contact is present for each contact pair at each point in time; inner list is length number of frames, outer list in length number of (included) contacts
- labels (list of string) – labels for each contact pair
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__init__(values, labels=None)[source]¶ Initialize self. See help(type(self)) for accurate signature.
Methods
__init__(values[, labels])Initialize self. set_labels(labels)Set the contact labels